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Scientific Session 3

CMI-P-22

Sun Choi

Ewha Womans University

Professor

South Korea

AI and computer-aided drug design, Computational medicinal chemistry, Drug discovery

ACADEMIC CAREER

[Academic and Professional Career]

• Assistant, Associate, Full Professor, College of Pharmacy and Graduate School of Pharmaceutical Sciences, Ewha Womans University (2005-present)

• Department Chair, Department of Pharmacy, College of Pharmacy, Ewha Womans University (2015-2017)

• Director, “Global AI Drug Discovery Center” (2020-present)

• Fellow, the Korean Academy of Science and Technology (FKAST) (2024-present)

• American Chemical Society ‘ACS Medicinal Chemistry Letters’ Associate Editor (2023-present)

• Council Member, the Asia Pacific Protein Association (APPA) (2025-present)

• Postdoctoral Fellow, Department of Chemistry and the Drug Discovery Program, Northwestern University, USA (1997-2001)

• Molecular Modeler / Computational Chemist, Tripos, Inc., USA (2001-2005)


[Leadership and Service to the Scientific Community]

• Presidential Advisory Council on Science and Technology, Chair of the Expert Committee on Life Sciences and Medicine (2021-2024)

• National Supercomputing Committee Member, Ministry of Science and ICT (2019-2021)

• President, the Korean Biophysical Society (KBPS) (2022-2024)

• President, the Korean Society for Protein Science (KSPS) (2018-2019)

SELECTED PUBLICATIONS
  • "GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory" H. Kang, A. Han, A. Zhang, ... S. Choi*, H. M. Kim*, and C. J. Lee*, Nat. Commun. 2024, 15, 5830.

  • "Employing Automated Machine Learning (AutoML) Methods to Facilitate the In Silico ADMET Properties Prediction" H. Han†, B. Shaker†, J. H. Lee†, S. Choi†, S. Yoon†, ..., S. Kang, M. S. Yeom*, and S. Choi*, Journal of Chemical Information and Modeling, 2025, 65(7), 3215-3225. 

  • "Dynamic allosteric networks drive adenosine A1 receptor activation and G-protein" M.A.M. Solano*, S. Choi*, eLife, 2023, 12(3), 31a.

  • "GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A2A Adenosine Receptor" A. Shiriaeva, D. Park, G. Kim, Y. Lee, ... L. S. Jeong*, S. Choi*, and V. Cherezov*, J. Med. Chem. 2022, 65(17), 11648-11657 (Cover).

  • "Subtle Chemical Changes Cross the Boundary between Agonist and Antagonist: New A3 Adenosine Receptor Homology Models and Structural Network Analysis Can Predict This Boundary," Y. Lee, X. Hou, J. H. Lee, A. ... K. A. Jacobson, S. Choi*, and L. S. Jeong*, J. Med. Chem. 2021, 64(17), 12525-12536 (Cover).

  • "N-terminus-independent activation of c-Src via binding to a tetraspan(in) TM4SF5 in hepatocellular carcinoma is abolished by the TM4SF5 C-terminal peptide application," H. E. Song, Y. Lee, ... S. Choi*, J. W. Lee*, Theranostics, 2021, 11(16), 8092-8111.

  • "Transmembrane 4 L Six Family Member 5 Senses Arginine for mTORC1 Signaling" J. W. Jung, S. J. Y. Macalino, M. Cui, J. E. Kim, H. J. Kim, D. G. Song, S. H. Nam, S. Kim, S. Choi*, J. W. Lee*, Cell Metabolism 2019, 29(6), 1306-1319.

  • "In Vivo Albumin Traps Photosensitizer Monomers from Self-Assembled Phthalocyanine Nanovesicles: A Facile and Switchable Theranostic Approach" X. Li, ... J.-D. Huang*, S. Choi*, K. T. Nam*, and J. Yoon*, J. Am. Chem. Soc. 2019, 141(3), 1366-1372 (Cover).

WHY MY LAB?

The research work in the Choi group is focused on Artificial Intelligence (AI)/Computer-Aided Drug Design (CADD) and drug discovery, molecular modeling, cheminformatics and computational medicinal chemistry. Using computational methods, we develop strategies for drug discovery involving cancer, virus, cardiovascular disease, neuropathic pain, etc. In-silico technologies, such as molecular modeling, CADD and virtual screening, when used in conjugation with experimental methods, significantly reduce the time and money required for drug discovery. Based on multiple disciplines required for drug discovery, the Choi group is involved in several international, active collaborations and scientific exchanges. Based on the high-quality and extensive research outcomes, we are continuously publishing articles in world-renowned journals, such as Nature Communications, Cell Metabolism, Journal of the American Chemical Society, Angewandte Chemie, Journal of Medicinal Chemistry, and Theranostics, etc. It was selected as the National Leading Research Laboratory (NLRL) funded by the Korean government, and has engaged in active research activities, leading the Global AI Drug Discovery Center. [Research Areas] ? Computer-Aided Drug Design (CADD) Methods and Applications, including Docking ? Protein-Ligand Interaction & their Mechanism of Action Studies ? Molecular Design, Combinatorial Library Design, Virtual Screening ? Drug Discovery Research for Various Diseases in Cell Signaling ? Biomolecular Simulations: Protein Motion and Allostery ? Theoretical Studies of Enzymatic & Chemical Reactions ? Big Data Analysis and Artificial Intelligence (AI)-based Drug Discovery

CMI-P-01

Motonari Uesugi

Kyoto University

Japan

Chemical biology, Chemoproteomics, Self-assembly, Chemical immunology

CMI-P-02

Kazuya Kikuchi

The University of Osaka

Japan

Molecular imaging, MRI, Fluorescent probes, Photo-activation

CMI-P-03

Takeaki Ozawa

The University of Tokyo

Japan

Fluorescence imaging, Bioluminescence analysis, Optogenetics

CMI-P-04

Midori Arai

Keio University

Japan

Natural products chemistry, Chemical biology, Organic chemistry

CMI-P-05

Takayoshi Suzuki

The University of Osaka

Japan

Medicinal chemistry, Epigenetics, New modality

CMI-P-06

Hideaki Kakeya

Kyoto University

Japan

Natural product chemistry, Chemical biology, Medicinal chemistry

CMI-P-07

Youhei Sohma

Wakayama Medical University

Japan

Peptide chemistry, Amyloid, Catalysis

CMI-P-08

Hiroyuki Nakamura

Institute of Science Tokyo

Japan

Medicinal chemistry, Cancer therapy, Protein modification

CMI-P-09

Akio Ojida

Kyushu University

Japan

Chemical biology, Medicinal chemistry

CMI-P-10

Shinya Hagihara

RIKEN

Japan

Plant chemical biology, Sustainable agriculture, New breeding technology

CMI-P-11

Masaki Kita

Nagoya University

Japan

Chemical biology, Natural products chemistry, Bioorganic chemistry

CMI-P-12

Go Hirai

Kyushu University

Japan

Bioorganic chemistry, Organic synthesis, Glycans, Lipids

CMI-P-13

Tasuku Hirayama

Gifu Pharmaceutical University

Japan

Imaging, Fluorescent probes, Bioinorganic chemistry

CMI-P-14

Fumika Yakushiji

Nagasaki University

Japan

Chemical epigenetics, Chemical probes, Synthetic organic chemistry, Peptide, Small molecules

CMI-P-15

Yuki Goto

Kyoto University

Japan

Peptides, Natural Products, Biosynthesis

CMI-P-16

Mikiko Sodeoka

RIKEN

Japan

Raman imaging, Affinity labeling, Cell death

CMI-P-17

Minoru Yoshida

RIKEN

Japan

Chemical genomics, Drug discovery, Target identification

CMI-P-18

Fumi Nagatsugi

Tohoku University

Japan

Nucleic acids chemistry, Organic chemistry, Chemical biology

CMI-P-19

Masaya Imoto

Juntendo University

Japan

Cell biology, Biochemistry, Chemical biology

CMI-P-20

Ho Jeong Kwon

Yonsei University

South Korea

Chemical biology, Chemical genomics, Chemical proteomics, Organelle interaction, Autophagy

CMI-P-21

Yongseok Choi

Korea University

South Korea

Medicinal chemistry, Autoimmune diseases, Fibrosis

CMI-P-22

Sun Choi

Ewha Womans University

South Korea

AI and computer-aided drug design, Computational medicinal chemistry, Drug discovery

CMI-P-23

Young-Tae Chang

POSTECH

South Korea

Chemical based aging research, Fluorescent imaging, Fluorescent probe, Cell selective probe, Reverse aging

CMI-P-24

Ja-Hyoung Ryu

UNIST

South Korea

Peptide assembly, PPI mimic, Supramolecular chemistry

CMI-P-25

Jun-Seok Lee

Seoul National University

South Korea

Fluorescent probe, Chemoproteomics, Drug mode of action

CMI-P-26

Hyun-Suk Lim

POSTECH

South Korea

Drug discovery, Targeted protein degradation, DNA-encoded library

CMI-P-27

Yan-Mei Li

Tsinghua University

China

PTMs of protein, Vaccine, cGAS-STING

CMI-P-28

Ming-Wei Wang

Research Center for Deepsea Bioresources

China

GPCR, PI3K alpha, Structural pharmacology, Drug discovery, Nanobody

CMI-P-29

Dan Yang

Westlake University

China

Disease mechanism, Fluorescent sensors, Molecular imaging, Proteomics, Drug development

CMI-P-30

YongXiang Chen

Tsinghua University

China

Protein and peptide chemistry, Protein modification, Phosphorus chemical biology, Biomedical application

CMI-P-31

Xiaoguang Lei

Peking University

China

Natural product, Chemical genetics, Drug discovery, Biosynthesis, Biocatalysis

CMI-P-32

Qian Zhao

Hong Kong Polytechnic Univeristy

China

Proteomics, Natural novel peptides, Mass spectrometry

CMI-P-33

Dehua Yang

Shanghai Institute of Materia Medica, CAS

China

GPCRs, GLP-1R, High-throughput screening, Signal transduction, Receptor pharmacology

CMI-P-34

Huan Wang

Nanjing University

China

Peptide, Protein, Enzyme, Natural product, Synthetic biology

CMI-P-35

Xin Zhang

Westlake University

China

Chemical biology, Biological chemistry, Fluorescent microscopy, Synthetic chemistry

CMI-P-36

Liyun Zhang

Nankai University

China

Synthetic biology, Biosensor, Biocatalysis

CMI-P-37

Zou Peng

Peking University

China

Proximity labeling, Voltage imaging, Neuroscience, Membraneless organelles

CMI-P-38

Bengang Xing

Hong Kong Polytechnic Univeristy

China

Chemical biology, Molecular probe & imaging, Bio-labeling, Molecular therapeutics, Nano-theranostics

CMI-P-39

Jing Yu

Tsinghua University

China

Biophysics, Assembly of biomacromolecules, Condensation of biomolecules

CMI-P-40

Shi-Zhong Luo

Beijing University of Chemical Technology

China

Bioactive peptide, Cell surface protein phase separation, Peptide drug, Drug delivery

CMI-P-41

Sandeep Verma

IIT Kanpur

India

Chemical neuroscience, Microfluidic devices, New antibiotics

CMI-P-42

Govindaraju Thimmaiah

JNCASR

India

Neurodegenerative diseases, Redox biology, Ferroptosis and cuproptosis, Neuroinflammation, Theranostics (diagnostic therapy)

CMI-P-43

Eylon Yavin

The Hebrew University

Israel

PNA, RNA sensors, Antisense, Fluorogenic dyes

CMI-P-44

Micha Fridman

Tel Aviv University

Israel

Antimicrobial agents, Fluorescent antifungal probes, Drug resistance and tolerance, Subcellular localization of small molecules

CMI-P-45

Doron Shabat

Tel Aviv University

Israel

Chemiluminsence, Molecular sensores, Bioorganic chemistry

CMI-P-46

Yuval Ebenstein

Tel Aviv University

Israel

Genomics and epigenetics, Fluorescence microscopy, Diagnostics

CMI-P-47

Amir Goldbourt

Tel Aviv University

Israel

Solid state nuclear magnetic resonance, Structural virology, NMR methods and developments

CMI-P-48

Chayasith Tao Uttamapinant

VISTEC

Thailand

Genetic code expansion, Liquid-liquid phase separation, Synthetic biology, Plastic waste bioremediation, Infectious diseases

CMI-P-49

Jay Chanat Aonbangkhen

Chulalongkorn University

Thailand

Chemical probes, Fluorescent dyes, Proteomics, Bioactive peptides, Cancer cell signaling

CMI-P-50

Jiranan Chotitumnavee

Mahidol University

Thailand

Epigenetics, Cancers, Pharmacology, Medicinal chemistry

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